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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G055060
Query referenceTK1151
LocationChr01:14261719-14266422 (-)
DescriptionSimilar to ACLB-1: ATP-citrate synthase beta chain protein 1 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_005407 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g49460 ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives.
Molecular characterization of a heteromeric ATP-citrate lyase that generates cytosolic acetyl-coenzyme A in Arabidopsis.2002 · DOI: 10.1104/pp.008110
At3g06650 ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0300200 ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA, used for the elongation of fatty acids and biosynthesis of isoprenoids, flavonoids and malonated derivatives. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006085acetyl-CoA biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006101citrate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.224; coverage=99.178; evalue=0.0; UniProt GO evidence=IC:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006633fatty acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.224; coverage=99.178; evalue=0.0; UniProt GO evidence=HDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045335phagocytic vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.511; coverage=99.178; evalue=0.0; UniProt GO evidence=HDA:dictyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140615ATP-dependent citrate lyase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003878ATP citrate synthase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016829lyase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G06650KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=90.132; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G49460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=90.789; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGddi:DDB_G0278345KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.511; coverage=99.178; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os01g0300200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=90.789; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGspo:2539879KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.224; coverage=99.178; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release