基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_038192 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr09:33959605-33964630 (+) |
| 描述 | Similar to RRP6L3: Protein RRP6-like 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_038192 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 54 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g32415 |
类RRP6蛋白3。 | 暂无已核实直接文献 |
At5g35910 |
通过多种沉默机制充当重要的表观遗传调节因子。 | |
At1g54440 |
通过多种沉默机制起重要的表观遗传调控作用。 |
Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thaliana.2008 · DOI: 10.1128/mcb.02064-07
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000460 | maturation of 5.8S rRNA | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000467 | exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006346 | DNA methylation-dependent constitutive heterochromatin formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.685; 覆盖度=41.488; E 值=8.32e-56; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006401 | RNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032211 | negative regulation of telomere maintenance via telomerase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033621 | nuclear mRNA surveillance of meiosis-specific transcripts | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042274 | ribosomal small subunit biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043633 | polyadenylation-dependent RNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.685; 覆盖度=41.488; E 值=8.32e-56; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070651 | nonfunctional rRNA decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071028 | nuclear mRNA surveillance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071034 | CUT catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071035 | nuclear polyadenylation-dependent rRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071036 | nuclear polyadenylation-dependent snoRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071037 | nuclear polyadenylation-dependent snRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071038 | TRAMP-dependent tRNA surveillance pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071039 | nuclear polyadenylation-dependent CUT catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071040 | nuclear polyadenylation-dependent antisense transcript catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071042 | nuclear polyadenylation-dependent mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071044 | histone mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071051 | poly(A)-dependent snoRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080188 | gene silencing by siRNA-directed DNA methylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.685; 覆盖度=41.488; E 值=8.32e-56; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140746 | siRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903705 | positive regulation of siRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904281 | positive regulation of transcription by RNA polymerase V | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904872 | regulation of telomerase RNA localization to Cajal body | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905746 | positive regulation of mRNA cis splicing, via spliceosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990280 | RNA localization to chromatin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000176 | nuclear exosome (RNase complex) | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000178 | exosome (RNase complex) | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032040 | small-subunit processome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071920 | cleavage body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140602 | nucleolar peripheral inclusion body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990251 | nuclear exosome focus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990342 | heterochromatin island | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000175 | 3'-5'-RNA exonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004532 | RNA exonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070034 | telomerase RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G54440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.461; 覆盖度=42.052; E 值=5.24e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G32415 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.773; 覆盖度=104.735; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G35910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.685; 覆盖度=41.488; E 值=8.32e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:313707 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=39.262; 覆盖度=33.596; E 值=9.96e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2543630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.592; 覆盖度=40.361; E 值=6.64e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release |