基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_036348 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:40551279-40552331 (+) |
| 描述 | Similar to SINAT2: E3 ubiquitin-protein ligase SINAT2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_036348 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g58040 |
E3 泛素蛋白连接酶,介导靶蛋白的泛素化和随后的蛋白酶体降解。 | |
At2g41980 |
E3 泛素蛋白连接酶,介导靶蛋白的泛素化和随后的蛋白酶体降解。 |
TRAF Family Proteins Regulate Autophagy Dynamics by Modulating AUTOPHAGY PROTEIN6 Stability in Arabidopsis.2017 · DOI: 10.1105/tpc.17.00056
|
At3g61790 |
E3 泛素蛋白连接酶,介导靶蛋白的泛素化和随后的蛋白酶体降解。 | |
At5g53360 |
E3泛素蛋白连接酶,介导靶蛋白的泛素化及随后的蛋白酶体降解。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os03g0356414 |
E3泛素蛋白连接酶,介导靶蛋白的泛素化及随后的蛋白酶体降解。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080148 | negative regulation of response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.072; 覆盖度=97.324; E 值=4.94e-148; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000785 | regulation of autophagosome assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=74.33; 覆盖度=87.291; E 值=1.17e-150; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G41980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.435; 覆盖度=100.669; E 值=5.8e-157 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G58040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.711; 覆盖度=101.672; E 值=7.39e-162 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=74.33; 覆盖度=87.291; E 值=1.17e-150 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G53360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=72.414; 覆盖度=87.291; E 值=7.37e-147 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0356414 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.072; 覆盖度=97.324; E 值=4.94e-148 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9266295 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=69.072; 覆盖度=97.324; E 值=4.94e-148 | UniProtKB/Swiss-Prot DAT 2026 current_release |