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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_035933
Query referenceOH1004
LocationChr08:32412666-32413485 (+)
DescriptionSimilar to CML42: Calcium-binding protein CML42 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035933 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 8 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g20780 Probable calcium sensor that binds calcium in vitro.
Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato.2005 · DOI: 10.1007/s11103-005-8395-x
The calmodulin-related calcium sensor CML42 plays a role in trichome branching.2009 · DOI: 10.1074/jbc.m109.056770
At5g44460 Calcium-binding protein that may mediate calcium-dependent signal during plant defense response.
Calmodulin-like proteins from Arabidopsis and tomato are involved in host defense against Pseudomonas syringae pv. tomato.2005 · DOI: 10.1007/s11103-005-8395-x

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0331700 Potential calcium sensor. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0010091trichome branchingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.612; coverage=94.686; evalue=2.04e-67; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051592response to calcium ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.612; coverage=94.686; evalue=2.04e-67; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005509calcium ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.612; coverage=94.686; evalue=2.04e-67; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061891calcium ion sensor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G20780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.612; coverage=94.686; evalue=2.04e-67UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G44460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=56.15; coverage=90.338; evalue=1.43e-61UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0331700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.438; coverage=92.754; evalue=1.72e-51UniProtKB/Swiss-Prot DAT 2026 current_release