Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_035112`
Query reference	OH1004
Location	Chr08:14752300-14753610 (-)
Description	Similar to Uncharacterized 38.1 kDa protein (Capnoides sempervirens OX%3D3464)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035112 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g40410`	Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	Molecular cloning, expression, and characterization of a Ca2+-dependent nuclease of Arabidopsis thaliana.2012 · DOI: 10.1016/j.pep.2012.03.007 Plant plasma membrane-bound staphylococcal-like DNases as a novel class of eukaryotic nucleases.2012 · DOI: 10.1186/1471-2229-12-195 Arabidopsis cysteine proteinase inhibitor AtCYSb interacts with a Ca(2+)-dependent nuclease, AtCaN2.2013 · DOI: 10.1016/j.febslet.2013.09.019
`At3g56170`	Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	Plant plasma membrane-bound staphylococcal-like DNases as a novel class of eukaryotic nucleases.2012 · DOI: 10.1186/1471-2229-12-195

Rice

Reference gene ID	Possible function	Papers / DOI
`Os12g0109200`	Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	No verified direct reference in this release
`Os11g0109500`	Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006308	DNA catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006401	RNA catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.635; coverage=73.498; evalue=2.11e-55; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003676	nucleic acid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.635; coverage=73.498; evalue=2.11e-55; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004518	nuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.312; coverage=65.724; evalue=7.22e-53; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004519	endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.635; coverage=73.498; evalue=2.11e-55; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004520	DNA endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004521	RNA endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016787	hydrolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.635; coverage=73.498; evalue=2.11e-55; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G40410	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=49.733; coverage=66.078; evalue=4.62e-55	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G56170	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.312; coverage=65.724; evalue=7.22e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os11g0109500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.898; coverage=69.258; evalue=8.91e-52	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os12g0109200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.408; coverage=69.258; evalue=1.43e-52	UniProtKB/Swiss-Prot DAT 2026 current_release