基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_034872 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr08:5898525-5911329 (-) |
| 描述 | Similar to BIG: Auxin transport protein BIG (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_034872 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 26 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g02260 |
生长素外排和极性生长素转运(PAT)所必需,影响细胞伸长、顶端优势、侧根形成、花序结构及整体生长发育等生长素介导的发育应答。 |
BIG: a calossin-like protein required for polar auxin transport in Arabidopsis.2001 · DOI: 10.1101/gad.905201 Mutations in the huge Arabidopsis gene BIG affect a range of hormone and light responses.2003 · DOI: 10.1046/j.1365-313x.2003.01779.x The auxin transport inhibitor response 3 (tir3) allele of BIG and auxin transport inhibitors affect the gibberellin status of Arabidopsis.2005 · DOI: 10.1111/j.1365-313x.2004.02287.x CRM1/BIG-mediated auxin action regulates Arabidopsis inflorescence development.2007 · DOI: 10.1093/pcp/pcm094
|
At1g70060 |
作为转录阻遏蛋白。 | 暂无已核实直接文献 |
At1g24190 |
作为转录阻遏蛋白。 | |
At3g01320 |
作为转录阻遏蛋白。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os09g0247700 |
对生长素外排和极性生长素运输(PAT)必需,影响生长素介导的发育反应(如细胞伸长、顶端优势、侧根产生、花序结构、总体生长和发育)(基于相似性)。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.333; 覆盖度=5.161; E 值=4.14e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009926 | auxin polar transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010311 | lateral root formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.333; 覆盖度=5.161; E 值=4.14e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048281 | inflorescence morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071596 | ubiquitin-dependent protein catabolic process via the N-end rule pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140455 | cytoplasm protein quality control | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000118 | histone deacetylase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070822 | Sin3-type complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.333; 覆盖度=5.161; E 值=4.14e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G24190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.333; 覆盖度=5.161; E 值=4.14e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G70060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=73.333; 覆盖度=5.161; E 值=2.32e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G01320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=73.913; 覆盖度=5.275; E 值=9.36e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G02260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=92.105; 覆盖度=4.358; E 值=2.33e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0247700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=91.892; 覆盖度=4.243; E 值=3.5e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |