Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`LXL04_034729`
Query reference	OH1004
Location	Chr07:115194794-115197287 (+)
Description	Similar to NUDT2: Nudix hydrolase 2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_034729 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 25 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g47650`	Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.	Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thaliana.2005 · DOI: 10.1074/jbc.m503536200 Overexpression of an ADP-ribose pyrophosphatase, AtNUDX2, confers enhanced tolerance to oxidative stress in Arabidopsis plants.2009 · DOI: 10.1111/j.1365-313x.2008.03686.x
`At4g25434`	May mediate the hydrolysis of some nucleoside diphosphate derivatives.	No verified direct reference in this release
`At4g12720`	Mediates the hydrolysis of some nucleoside diphosphate derivatives.	Analysis of Arabidopsis growth factor gene 1 (GFG1) encoding a nudix hydrolase during oxidative signaling.2006 · DOI: 10.1007/s00425-005-0183-y Salicylic acid-independent ENHANCED DISEASE SUSCEPTIBILITY1 signaling in Arabidopsis immunity and cell death is regulated by the monooxygenase FMO1 and the Nudix hydrolase NUDT7.2006 · DOI: 10.1105/tpc.105.039982 AtNUDT7, a negative regulator of basal immunity in Arabidopsis, modulates two distinct defense response pathways and is involved in maintaining redox homeostasis.2007 · DOI: 10.1104/pp.107.103374
`At5g47240`	Probably mediates the hydrolysis of some nucleoside diphosphate derivatives (By similarity).	Functional characterization of a Nudix hydrolase AtNUDX8 upon pathogen attack indicates a positive role in plant immune responses.2014 · DOI: 10.1371/journal.pone.0114119
`At2g04450`	Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002758	innate immune response-activating signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009611	response to wounding	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.889; coverage=82.569; evalue=1.81e-91; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010193	response to ozone	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010581	regulation of starch biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051707	response to other organism	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.692; coverage=79.511; evalue=5.41e-89; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0070212	protein poly-ADP-ribosylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080151	positive regulation of salicylic acid mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.692; coverage=79.511; evalue=5.41e-89; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.094; coverage=81.04; evalue=5e-100; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000210	NAD+ diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0017110	nucleoside diphosphate phosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035529	NADH pyrophosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047631	ADP-ribose diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051287	NAD binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080041	ADP-ribose pyrophosphohydrolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080042	ADP-glucose pyrophosphohydrolase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G04450	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.692; coverage=79.511; evalue=5.41e-89	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G12720	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=52.896; coverage=79.205; evalue=1.84e-94	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G25434	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=55.094; coverage=81.04; evalue=5e-100	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G47240	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.889; coverage=82.569; evalue=1.81e-91	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G47650	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=59.574; coverage=86.239; evalue=5.36e-121	UniProtKB/Swiss-Prot DAT 2026 current_release