Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`LXL04_034255`
Query reference	OH1004
Location	Chr07:93410203-93412866 (+)
Description	Similar to ENDO4: Endonuclease 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_034255 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g21585`	Endonuclease that can use single-stranded RNA and DNA as substrates.	No verified direct reference in this release
`At4g21600`	Hydrolyzes, with low efficiency, only single-stranded DNA and RNA without apparent specificity for bases.	No verified direct reference in this release
`At4g21590`	Endonuclease that can use RNA and single-stranded DNA as substrates.	No verified direct reference in this release
`At1g68290`	Endonuclease mostly active on RNA and ssDNA, and to a lower extent, on dsDNA.	Arabidopsis ENDO2: its catalytic role and requirement of N-glycosylation for function.2012 · DOI: 10.1021/jf300945c
`At1g11190`	Endonuclease that can use RNA, single-stranded and double- stranded DNA as substrates.	Identification of BFN1, a bifunctional nuclease induced during leaf and stem senescence in Arabidopsis.2000 · DOI: 10.1104/pp.122.1.169 Characterization of Arabidopsis thaliana mismatch specific endonucleases: application to mutation discovery by TILLING in pea.2007 · DOI: 10.1111/j.1365-313x.2007.03201.x Expression analysis of the BFN1 nuclease gene promoter during senescence, abscission, and programmed cell death-related processes.2008 · DOI: 10.1093/jxb/ern176

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006308	DNA catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010150	leaf senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.506; coverage=75.698; evalue=5.18e-101; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080187	floral organ senescence	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.506; coverage=75.698; evalue=5.18e-101; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005576	extracellular region	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000014	single-stranded DNA endodeoxyribonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003676	nucleic acid binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004519	endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004521	RNA endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016891	RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.506; coverage=75.698; evalue=5.18e-101; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043765	T/G mismatch-specific endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.071; coverage=94.413; evalue=1.61e-123; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990238	double-stranded DNA endonuclease activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.629; coverage=88.827; evalue=3.15e-107; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G11190	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.506; coverage=75.698; evalue=5.18e-101	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G68290	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.629; coverage=88.827; evalue=3.15e-107	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G21585	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.702; coverage=94.693; evalue=1.81e-144	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G21590	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=51.183; coverage=94.413; evalue=2.49e-118	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G21600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.071; coverage=94.413; evalue=1.61e-123	UniProtKB/Swiss-Prot DAT 2026 current_release