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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_033138
Query referenceOH1004
LocationChr07:36947004-36948495 (-)
DescriptionSimilar to PSA2: Protein PHOTOSYSTEM I ASSEMBLY 2%2C chloroplastic (Zea mays OX%3D4577)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_033138 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g34860 Involved in female gametophyte development.
A thylakoid membrane protein harboring a DnaJ-type zinc finger domain is required for photosystem I accumulation in plants.2014 · DOI: 10.1074/jbc.m114.587758
The DnaJ-Like Zinc Finger Domain Protein PSA2 Affects Light Acclimation and Chloroplast Development in Arabidopsis thaliana.2016 · DOI: 10.3389/fpls.2016.00360

Rice

Reference gene IDPossible functionPapers / DOI
Os08g0463900 Nuclear genome-encoded factor required for the accumulation of photosystem I (PSI) during plant development. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009561megagametogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010027thylakoid membrane organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048564photosystem I assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009534chloroplast thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009535chloroplast thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009543chloroplast thylakoid lumenCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031977thylakoid lumenCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0047134protein-disulfide reductase [NAD(P)H] activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G34860KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=68.992; coverage=59.722; evalue=2.21e-58UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os08g0463900KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.248; coverage=65.278; evalue=1.71e-60UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4345779KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.248; coverage=65.278; evalue=1.71e-60UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:100277608KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.011; coverage=86.574; evalue=9.86e-62UniProtKB/Swiss-Prot DAT 2026 current_release