Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_032355`
Query reference	OH1004
Location	Chr07:21251197-21255814 (+)
Description	Similar to CESA1: Cellulose synthase A catalytic subunit 1 [UDP-forming] (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032355 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g32410`	Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.	Fractionation of carbohydrates in Arabidopsis root cell walls shows that three radial swelling loci are specifically involved in cellulose production.2000 · DOI: 10.1007/s004250000301 PROCUSTE1 encodes a cellulose synthase required for normal cell elongation specifically in roots and dark-grown hypocotyls of Arabidopsis.2000 · DOI: 10.1105/tpc.12.12.2409 Morphology of rsw1, a cellulose-deficient mutant of Arabidopsis thaliana.2001 · DOI: 10.1007/bf01280308 Wall architecture in the cellulose-deficient rsw1 mutant of Arabidopsis thaliana: microfibrils but not microtubules lose their transverse alignment before microfibrils become unrecognizable in the mitotic and elongation zones of roots.2001 · DOI: 10.1007/bf01280312 Alpha-glucosidase I is required for cellulose biosynthesis and morphogenesis in Arabidopsis.2002 · DOI: 10.1083/jcb.200111093 Functional analysis of the cellulose synthase genes CesA1, CesA2, and CesA3 in Arabidopsis.2002 · DOI: 10.1104/pp.010931 Genetic complexity of cellulose synthase a gene function in Arabidopsis embryogenesis.2002 · DOI: 10.1104/pp.102.010603 Genetic evidence for three unique components in primary cell-wall cellulose synthase complexes in Arabidopsis.2007 · DOI: 10.1073/pnas.0706592104 Organization of cellulose synthase complexes involved in primary cell wall synthesis in Arabidopsis thaliana.2007 · DOI: 10.1073/pnas.0706569104 Molecular analysis of cellulose biosynthesis in Arabidopsis.1998 · DOI: 10.1126/science.279.5351.717
`At2g25540`	Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.	No verified direct reference in this release
`At5g05170`	Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.	The Arabidopsis mutant cev1 has constitutively active jasmonate and ethylene signal pathways and enhanced resistance to pathogens.2001 · DOI: 10.1105/tpc.13.5.1025 Functional analysis of the cellulose synthase genes CesA1, CesA2, and CesA3 in Arabidopsis.2002 · DOI: 10.1104/pp.010931 The Arabidopsis mutant cev1 links cell wall signaling to jasmonate and ethylene responses.2002 · DOI: 10.1105/tpc.002022 Reduced cellulose synthesis invokes lignification and defense responses in Arabidopsis thaliana.2003 · DOI: 10.1046/j.1365-313x.2003.01729.x Genetic evidence for three unique components in primary cell-wall cellulose synthase complexes in Arabidopsis.2007 · DOI: 10.1073/pnas.0706592104 Organization of cellulose synthase complexes involved in primary cell wall synthesis in Arabidopsis thaliana.2007 · DOI: 10.1073/pnas.0706569104

Rice

Reference gene ID	Possible function	Papers / DOI
`Os05g0176100`	Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.	No verified direct reference in this release
`UniProt: A2Y0X2`	Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.888; coverage=99.537; evalue=0.0; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009832	plant-type cell wall biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009833	plant-type primary cell wall biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009834	plant-type secondary cell wall biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.018; coverage=100.833; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030244	cellulose biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042538	hyperosmotic salinity response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071555	cell wall organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.888; coverage=99.537; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005768	endosome	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005802	trans-Golgi network	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.888; coverage=99.537; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016759	cellulose synthase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016760	cellulose synthase (UDP-forming) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.888; coverage=99.537; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G32410	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=84.502; coverage=100.278; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G05170	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.888; coverage=99.537; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os05g0176100	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=82.018; coverage=100.833; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release