Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_030501`
Query reference	OH1004
Location	Chr06:117367527-117370639 (+)
Description	Similar to RIPK: Serine/threonine-protein kinase RIPK (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_030501 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 30 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g28690`	Involved in chitin-triggered immune signaling and is required for reactive oxygen species (ROS) production.	Tyrosine phosphorylation of the lectin receptor-like kinase LORE regulates plant immunity.2020 · DOI: 10.15252/embj.2019102856 Receptor-like cytoplasmic kinases PBL34/35/36 are required for CLE peptide-mediated signaling to maintain shoot apical meristem and root apical meristem homeostasis in Arabidopsis.2022 · DOI: 10.1093/plcell/koab315
`At2g05940`	Serine/threonine-protein kinase involved in disease resistance.	xopAC-triggered immunity against Xanthomonas depends on Arabidopsis receptor-like cytoplasmic kinase genes PBL2 and RIPK.2013 · DOI: 10.1371/journal.pone.0073469 Pseudomonas syringae Effector AvrPphB Suppresses AvrB-Induced Activation of RPM1 but Not AvrRpm1-Induced Activation.2015 · DOI: 10.1094/mpmi-08-14-0248-r
`At1g07870`	May be involved in plant defense signaling.	No verified direct reference in this release
`At3g01300`	Involved in chitin-triggered immune signaling and is required for reactive oxygen species (ROS) production.	Tyrosine phosphorylation of the lectin receptor-like kinase LORE regulates plant immunity.2020 · DOI: 10.15252/embj.2019102856 Receptor-like cytoplasmic kinases PBL34/35/36 are required for CLE peptide-mediated signaling to maintain shoot apical meristem and root apical meristem homeostasis in Arabidopsis.2022 · DOI: 10.1093/plcell/koab315
`At5g45780`	Receptor kinase acting, redundantly with other CIKs (e.g. CIK1, CIK2, CIK3, CIK5 and CIK6), as a coreceptor of CLV1, CLV2/CRN and RPK2, and required for CLAVATA-family peptides (e.g. CLV3, CLE25, CLE26 and CLE45) signaling through phosphorylation; this signaling regulates protophloem differentiation and the maintenance of shoot apical meristem (SAM) and root apical meristem (RAM) homeostasis, and acts down-stream of BRX and OPS.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0002221	pattern recognition receptor signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0002238	response to molecule of fungal origin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006468	protein phosphorylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007165	signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007166	cell surface receptor signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007639	homeostasis of number of meristem cells	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.45; coverage=49.671; evalue=2.37e-23; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010073	meristem maintenance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010078	maintenance of root meristem identity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010088	phloem development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010183	pollen tube guidance	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010492	maintenance of shoot apical meristem identity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031663	lipopolysaccharide-mediated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032491	detection of molecule of fungal origin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042742	defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048653	anther development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.45; coverage=49.671; evalue=2.37e-23; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050832	defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0062207	regulation of pattern recognition receptor signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=EXP:PHI-base	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0071456	cellular response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24; UniProt GO evidence=HEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901653	cellular response to peptide	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1903428	positive regulation of reactive oxygen species biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090404	pollen tube tip	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004672	protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004674	protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0015026	coreceptor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.45; coverage=49.671; evalue=2.37e-23; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106310	protein serine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G07870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.062; coverage=58.059; evalue=2.58e-24	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G05940	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.973; coverage=37.171; evalue=5.4e-25	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G01300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.416; coverage=37.171; evalue=5.87e-24	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G28690	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=30.973; coverage=37.171; evalue=1.85e-25	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G45780	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.45; coverage=49.671; evalue=2.37e-23	UniProtKB/Swiss-Prot DAT 2026 current_release