Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029898 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:102990630-102992337 (-) |
| Description | Similar to SYP22: Syntaxin-22 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029898 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 45 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g46860 |
May provide the t-SNARE function in the vacuolar assembly. | |
At4g17730 |
May function in the docking or fusion of transport vesicles with the prevacuolar membrane. | No verified direct reference in this release |
At5g16830 |
May function in the docking or fusion of transport vesicles with the prevacuolar membrane. | No verified direct reference in this release |
At1g32270 |
Vesicle trafficking protein that functions in the secretory pathway. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006623 | protein targeting to vacuole | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.662; coverage=98.551; evalue=6.27e-104; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006891 | intra-Golgi vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.862; coverage=84.058; evalue=2.81e-59; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006896 | Golgi to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.662; coverage=98.551; evalue=6.27e-104; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006906 | vesicle fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008333 | endosome to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009597 | detection of virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.66; coverage=89.493; evalue=8.06e-109; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009660 | amyloplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009959 | negative gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010118 | stomatal movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016189 | synaptic vesicle to endosome fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=IDA:SynGO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048278 | vesicle docking | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061025 | membrane fusion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902685 | positive regulation of receptor localization to synapse | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903076 | regulation of protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.66; coverage=89.493; evalue=8.06e-109; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005764 | lysosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.662; coverage=98.551; evalue=6.27e-104; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.66; coverage=89.493; evalue=8.06e-109; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009705 | plant-type vacuole membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.662; coverage=98.551; evalue=6.27e-104; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030139 | endocytic vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030140 | trans-Golgi network transport vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031201 | SNARE complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031902 | late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031982 | vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042582 | azurophil granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055037 | recycling endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070820 | tertiary granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000149 | SNARE binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005484 | SNAP receptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019869 | chloride channel inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.597; coverage=91.667; evalue=8.27e-33; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G32270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.862; coverage=84.058; evalue=2.81e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G17730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=71.66; coverage=89.493; evalue=8.06e-109 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G16830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=60.662; coverage=98.551; evalue=6.27e-104 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G46860 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.566; coverage=96.014; evalue=5.12e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release |