Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_029698 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:97406358-97408908 (+) |
| Description | Similar to BASS5: Probable sodium/metabolite cotransporter BASS5%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_029698 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g22840 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
At4g12030 |
Plastidic transporter involved in the biosynthesis of aliphatic glucosinolates by translocating the biosynthetic intermediates of Met-derived glucosinolates across chloroplast membranes. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os09g0520600 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
UniProt: B8BDK4 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
Os02g0475400 |
May function as sodium-coupled metabolite transporter across the chloroplast envelope. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019761 | glucosinolate biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033506 | glucosinolate biosynthetic process from homomethionine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.856; coverage=80.594; evalue=6.02e-163; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.673; coverage=76.027; evalue=6.1e-165; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.673; coverage=76.027; evalue=6.1e-165; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008028 | monocarboxylic acid transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043879 | glycolate transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.856; coverage=80.594; evalue=6.02e-163; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G12030 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.861; coverage=68.95; evalue=2.9e-152 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G22840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=66.856; coverage=80.594; evalue=6.02e-163 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0475400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.172; coverage=66.21; evalue=2.63e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os09g0520600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=72.673; coverage=76.027; evalue=6.1e-165 | UniProtKB/Swiss-Prot DAT 2026 current_release |