Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_028191 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:33794453-33797605 (-) |
| Description | Similar to SPS3: Solanesyl diphosphate synthase 3%2C chloroplastic/mitochondrial (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028191 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g34630 |
May be involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os06g0678200 |
Involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006744 | ubiquinone biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008299 | isoprenoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010142 | farnesyl diphosphate biosynthetic process, mevalonate pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010236 | plastoquinone biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.25; coverage=90.498; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046165 | alcohol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.155; coverage=90.724; evalue=5.33e-76; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.027; coverage=83.71; evalue=6.72e-74; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031314 | extrinsic component of mitochondrial inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032476 | polyprenyl diphosphate synthase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032478 | heterotetrameric polyprenyl diphosphate synthase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.027; coverage=83.71; evalue=6.72e-74; UniProt GO evidence=IGI:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000010 | heptaprenyl diphosphate synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004161 | dimethylallyltranstransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004311 | geranylgeranyl diphosphate synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.25; coverage=90.498; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004659 | prenyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052923 | all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.25; coverage=90.498; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052924 | all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097269 | all-trans-decaprenyl-diphosphate synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74; UniProt GO evidence=IEA:EnsemblFungi | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G34630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.252; coverage=96.833; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os06g0678200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.25; coverage=90.498; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:56075 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.027; coverage=83.71; evalue=6.72e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ncr:NCU02305 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.155; coverage=90.724; evalue=5.33e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | yli:2909963 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.012; coverage=94.344; evalue=1.47e-74 | UniProtKB/Swiss-Prot DAT 2026 current_release |