Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_027025`
Query reference	OH1004
Location	Chr06:7171960-7174192 (+)
Description	Similar to DSP1: Tyrosine-protein phosphatase DSP1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027025 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g05000`	Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates.	Structural and functional characterization of a novel phosphatase from the Arabidopsis thaliana gene locus At1g05000.2008 · DOI: 10.1002/prot.22041 Phylogenetic and genetic linkage between novel atypical dual-specificity phosphatases from non-metazoan organisms.2011 · DOI: 10.1007/s00438-011-0611-6 A structural exposé of noncanonical molecular reactivity within the protein tyrosine phosphatase WPD loop.2022 · DOI: 10.1038/s41467-022-29673-y Arabidopsis PFA-DSP-Type Phosphohydrolases Target Specific Inositol Pyrophosphate Messengers.2022 · DOI: 10.1021/acs.biochem.2c00145
`At2g32960`	Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates.	No verified direct reference in this release
`At4g03960`	Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0771400`	Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates (By similarity).	Two homologous putative protein tyrosine phosphatases, OsPFA-DSP2 and AtPFA-DSP4, negatively regulate the pathogen response in transgenic plants.2012 · DOI: 10.1371/journal.pone.0034995
`Os09g0135700`	Cleaves the beta-phosphate at the 5-position of soluble inositol pyrophosphates (By similarity).	OsPFA-DSP1, a rice protein tyrosine phosphatase, negatively regulates drought stress responses in transgenic tobacco and rice plants.2012 · DOI: 10.1007/s00299-011-1220-x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.591; coverage=92.821; evalue=1.78e-67; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900150	regulation of defense response to fungus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.591; coverage=92.821; evalue=1.78e-67; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1900424	regulation of defense response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.228; coverage=81.026; evalue=1.45e-66; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.591; coverage=92.821; evalue=1.78e-67; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016791	phosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042802	identical protein binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.646; coverage=98.462; evalue=3.79e-68; UniProt GO evidence=IPI:IntAct	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052845	inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052847	inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052848	inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106211	inositol-5-diphosphate-1,3,4,6-tetrakisphosphate diphosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G05000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.78; coverage=81.538; evalue=1.2e-73	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G32960	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.646; coverage=98.462; evalue=3.79e-68	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G03960	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=58.228; coverage=81.026; evalue=1.45e-66	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0771400	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.591; coverage=92.821; evalue=1.78e-67	UniProtKB/Swiss-Prot DAT 2026 current_release