Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_026898`
Query reference	OH1004
Location	Chr06:4983242-4984453 (-)
Description	Similar to SPL8: Squamosa promoter-binding-like protein 8 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_026898 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g02065`	Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3'.	SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis.2003 · DOI: 10.1105/tpc.010678 Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains.2005 · DOI: 10.1016/j.jmb.2005.07.013 SPL8, a local regulator in a subset of gibberellin-mediated developmental processes in Arabidopsis.2007 · DOI: 10.1007/s11103-006-9099-6
`At1g20980`	Trans-acting factor that binds specifically to the consensus nucleotide sequence 5'-TNCGTACAA-3' (By similarity).	Arabidopsis AtSPL14, a plant-specific SBP-domain transcription factor, participates in plant development and sensitivity to fumonisin B1.2005 · DOI: 10.1111/j.1365-313x.2005.02334.x

Rice

Reference gene ID	Possible function	Papers / DOI
`UniProt: Q01KM7`	Probable transcription factor that plays an important role in building the laminar joint between leaf blade and leaf sheath boundary, thereby controlling ligule and auricle development.	No verified direct reference in this release
`Os04g0656500`	Probable transcription factor that plays an important role in building the laminar joint between leaf blade and leaf sheath boundary, thereby controlling ligule and auricle development.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.136; coverage=31.034; evalue=2.49e-33; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009554	megasporogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009555	pollen development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009556	microsporogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030154	cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.136; coverage=31.034; evalue=2.49e-33; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048653	anther development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001216	DNA-binding transcription activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.136; coverage=31.034; evalue=2.49e-33; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008270	zinc ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G02065	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.282; coverage=114.176; evalue=5.78e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G20980	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.136; coverage=31.034; evalue=2.49e-33	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0656500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.215; coverage=30.268; evalue=1.56e-35	UniProtKB/Swiss-Prot DAT 2026 current_release