基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_025674 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:115074360-115078702 (-) |
| 描述 | Similar to PRP40C: Pre-mRNA-processing protein 40C (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_025674 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 21 条 GO 注释和 3 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008380 | RNA splicing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=TAS:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034244 | negative regulation of transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=TAS:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IDA:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=TAS:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.642; 覆盖度=61.305; E 值=6.13e-59; UniProt GO evidence=ISS:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003711 | transcription elongation factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=TAS:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003713 | transcription coactivator activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044390 | ubiquitin-like protein conjugating enzyme binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IPI:ARUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070063 | RNA polymerase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070064 | proline-rich region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.642; 覆盖度=61.305; E 值=6.13e-59; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G19840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=52.753; 覆盖度=87.852; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:10915 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=29.982; 覆盖度=61.53; E 值=3.13e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:56070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.642; 覆盖度=61.305; E 值=6.13e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release |