基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_025103 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:105991009-105994108 (-) |
| 描述 | |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_025103 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 17 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g01730 |
切割和多聚腺苷酸化特异因子(CPSF)复合体的组成部分,在前mRNA 3'端形成中起关键作用,识别AAUAAA信号序列,并与多聚腺苷酸聚合酶及其他因子相互作用,从而实现3'端切割和多聚腺苷酸添加。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006366 | transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006368 | transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010197 | polar nucleus fusion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016180 | snRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034243 | regulation of transcription elongation by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034472 | snRNA 3'-end processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160240 | RNA polymerase II transcription initiation surveillance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=60.85; 覆盖度=70.728; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032039 | integrator complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160232 | INTAC complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004521 | RNA endonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G01730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=65.954; 覆盖度=96.203; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0278189 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=59.627; 覆盖度=76.424; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:419418 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=58.316; 覆盖度=75.158; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:71957 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=60.85; 覆盖度=70.728; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:298688 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=60.85; 覆盖度=70.728; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |