基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_024838 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:100247893-100249823 (+) |
| 描述 | Similar to FUM1: Fumarate hydratase 1%2C mitochondrial (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_024838 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g47510 |
催化富马酸与L-苹果酸之间的可逆立体特异性互变反应。 | |
At5g50950 |
细胞质富马酸水合酶,催化富马酸与L-苹果酸的可逆、立体专一性互变反应。 |
Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen.2010 · DOI: 10.1111/j.1365-313x.2010.04189.x
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000050 | urea cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006099 | tricarboxylic acid cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006106 | fumarate metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006108 | malate metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=50.909; 覆盖度=28.796; E 值=5.25e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006525 | arginine metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009631 | cold acclimation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010109 | regulation of photosynthesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042128 | nitrate assimilation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048868 | pollen tube development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051262 | protein tetramerization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120162 | positive regulation of cold-induced thermogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001034 | positive regulation of double-strand break repair via nonhomologous end joining | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005759 | mitochondrial matrix | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.769; 覆盖度=27.225; E 值=2.21e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004333 | fumarate hydratase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G47510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=63.636; 覆盖度=28.796; E 值=4.76e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G50950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=63.636; 覆盖度=28.796; E 值=1.75e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_H14A12.2 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=55.769; 覆盖度=27.225; E 值=2.21e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539345 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=50.909; 覆盖度=28.796; E 值=5.25e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ssc:100627128 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=50.943; 覆盖度=27.749; E 值=2.84e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release |