基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_024820 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:99566465-99568335 (+) |
| 描述 | Similar to RVE1: Protein REVEILLE 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_024820 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g17300 |
整合生物钟和生长素途径的晨间转录因子。 | |
At5g37260 |
冷反应基因表达和耐冷性的正调节因子。 | |
At3g10113 |
可能的转录因子。 | 暂无已核实直接文献 |
At1g18330 |
参与光敏色素 A 介导的子叶张开过程的转录因子。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=49.794; 覆盖度=69.628; E 值=1.87e-53; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=49.794; 覆盖度=69.628; E 值=1.87e-53; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010597 | green leaf volatile biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.257; 覆盖度=32.378; E 值=7.37e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010600 | regulation of auxin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042752 | regulation of circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.257; 覆盖度=32.378; E 值=7.37e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.257; 覆盖度=32.378; E 值=7.37e-35; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.257; 覆盖度=32.378; E 值=7.37e-35; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G18330 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=36.203; 覆盖度=113.181; E 值=1.58e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G10113 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.123; 覆盖度=97.708; E 值=6.65e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G17300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=43.396; 覆盖度=106.304; E 值=5.7e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G37260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=49.794; 覆盖度=69.628; E 值=1.87e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release |