基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_024471 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:91622110-91623648 (+) |
| 描述 | Similar to RHD6: Transcription factor RHD6 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_024471 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g66470 |
特异性要求用于根毛发育的转录因子。 | |
At5g37800 |
特异性要求用于根毛发育的转录因子。 | 暂无已核实直接文献 |
At4g33880 |
参与根毛延长调控的转录因子。 | |
At1g27740 |
参与根毛延长调控的转录因子。 |
A basic helix-loop-helix transcription factor controls cell growth and size in root hairs.2010 · DOI: 10.1038/ng.529 Intensity of a pulse of RSL4 transcription factor synthesis determines Arabidopsis root hair cell size.2015 · DOI: 10.1038/nplants.2015.138
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os12g0508500 |
作为铁稳态调节因子的转录因子。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.291; 覆盖度=44.561; E 值=1.72e-52; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=58.571; 覆盖度=24.561; E 值=4.89e-23; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=58.333; 覆盖度=25.263; E 值=5.44e-23; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048766 | root hair initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048768 | root hair cell tip growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=58.333; 覆盖度=25.263; E 值=5.44e-23; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046983 | protein dimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G27740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=58.333; 覆盖度=25.263; E 值=5.44e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G66470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.341; 覆盖度=86.316; E 值=6.74e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G33880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=58.571; 覆盖度=24.561; E 值=4.89e-23 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G37800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.291; 覆盖度=44.561; E 值=1.72e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:107276670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.144; 覆盖度=38.947; E 值=6.46e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release |