Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_024136 |
|---|---|
| Query reference | OH1004 |
| Location | Chr05:82048894-82050812 (-) |
| Description | Similar to IBS1: Protein IMPAIRED IN BABA-INDUCED STERILITY 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024136 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g39420 |
Cyclin-dependent kinase C-2 C. | No verified direct reference in this release |
At1g18670 |
Required for beta-aminobutyric acid (BABA)-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) via priming for salicylate (SA)-dependent defense responses such as pathogenesis-related PR-1 gene expression and trailing necrosis. | |
At1g54610 |
Probable serine/threonine-protein kinase At1g54610. | No verified direct reference in this release |
At1g09600 |
Probable serine/threonine-protein kinase At1g09600. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0958000 |
Cyclin-dependent kinase C-2. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002229 | defense response to oomycetes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=69.167; evalue=1.92e-108; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900426 | positive regulation of defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902290 | positive regulation of defense response to oomycetes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000031 | regulation of salicylic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=69.167; evalue=1.92e-108; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008353 | RNA polymerase II CTD heptapeptide repeat kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.323; coverage=82.5; evalue=4.5e-175; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G09600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.035; coverage=71.25; evalue=4.21e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G18670 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.746; coverage=75.417; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G54610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=57.323; coverage=82.5; evalue=4.5e-175 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G39420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.935; coverage=80.208; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0958000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=69.167; evalue=1.92e-108 | UniProtKB/Swiss-Prot DAT 2026 current_release |