基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_023974 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:76382940-76384923 (-) |
| 描述 | Similar to SNL6: Cinnamoyl-CoA reductase-like SNL6 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_023974 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g35420 |
参与作为孢粉质前体的羟基化四酮化合物的生物合成。 | |
At1g15950 |
参与木质素生物合成的后期阶段。 |
Cloning and characterization of irregular xylem4 (irx4): a severely lignin-deficient mutant of Arabidopsis.2001 · DOI: 10.1046/j.1365-313x.2001.01021.x Reassessment of effects on lignification and vascular development in the irx4 Arabidopsis mutant.2005 · DOI: 10.1016/j.phytochem.2004.12.016
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0639200 |
参与防御响应。 | |
Os02g0808800 |
参与木质素生物合成的后期阶段。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006694 | steroid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.877; 覆盖度=78.082; E 值=2.54e-26; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.338; 覆盖度=72.877; E 值=5.07e-26; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009699 | phenylpropanoid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010584 | pollen exine formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010597 | green leaf volatile biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080110 | sporopollenin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016621 | cinnamoyl-CoA reductase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=33.435; 覆盖度=90.137; E 值=1.94e-33; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G15950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.338; 覆盖度=72.877; E 值=5.07e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G35420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=30.483; 覆盖度=73.699; E 值=3.61e-27 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0639200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0808800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.877; 覆盖度=78.082; E 值=2.54e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4326581 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.207; 覆盖度=104.384; E 值=3.07e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release |