基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_023912 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr05:73906867-73913463 (-) |
| 描述 | Similar to SOG1: SUPPRESSOR OF GAMMA RESPONSE 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_023912 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 16 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g25580 |
转录因子,调控对伽马射线的转录激活反应。 |
Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage.2009 · DOI: 10.1073/pnas.0810304106
|
At4g29230 |
参与木质部形成的转录激活因子。 | 暂无已核实直接文献 |
At1g28470 |
转录激活因子,在次生细胞壁纤维发育中起调控作用。 | |
At4g28500 |
转录激活剂,在次生细胞壁纤维的发育中发挥调节作用。 | |
At1g33060 |
通过受调控的膜内蛋白水解(RIP)活化的转录激活因子。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000077 | DNA damage checkpoint signaling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010321 | regulation of vegetative phase change | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.545; 覆盖度=52.381; E 值=3.54e-60; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010332 | response to gamma radiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040020 | regulation of meiotic nuclear division | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=54.595; 覆盖度=51.821; E 值=2.81e-60; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.545; 覆盖度=52.381; E 值=3.54e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905177 | tracheary element differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.545; 覆盖度=52.381; E 值=3.54e-60; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=54.595; 覆盖度=51.821; E 值=2.81e-60; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.915; 覆盖度=65.546; E 值=9.25e-15; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000987 | cis-regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.545; 覆盖度=52.381; E 值=3.54e-60; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G25580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=47.471; 覆盖度=71.989; E 值=3.03e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G28470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=54.595; 覆盖度=51.821; E 值=2.81e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G33060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=29.915; 覆盖度=65.546; E 值=9.25e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G28500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=54.696; 覆盖度=50.7; E 值=3.88e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G29230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=54.545; 覆盖度=52.381; E 值=3.54e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release |