Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_022415 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:149737939-149740333 (+) |
| Description | Similar to SYT3: Synaptotagmin-3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022415 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 37 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g04220 |
May be involved in membrane trafficking. | No verified direct reference in this release |
At1g20080 |
May play an important role in regulating an unconventional protein trafficking from the cytosol to the extracellular matrix. | |
At3g61050 |
May be involved in membrane trafficking (By similarity). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006869 | lipid transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.958; coverage=44.172; evalue=3.06e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009306 | protein secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.549; coverage=62.577; evalue=2.13e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009958 | positive gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035621 | ER to Golgi ceramide transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061817 | endoplasmic reticulum-plasma membrane tethering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071476 | cellular hypotonic response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090158 | endoplasmic reticulum membrane organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120009 | intermembrane lipid transfer | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.549; coverage=62.577; evalue=2.13e-12; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.549; coverage=62.577; evalue=2.13e-12; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.958; coverage=44.172; evalue=3.06e-13; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031520 | plasma membrane of cell tip | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140268 | endoplasmic reticulum-plasma membrane contact site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160219 | cortical endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005543 | phospholipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=ISM:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005544 | calcium-dependent phospholipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008429 | phosphatidylethanolamine binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031210 | phosphatidylcholine binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035091 | phosphatidylinositol binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043495 | protein-membrane adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IC:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097001 | ceramide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120013 | lipid transfer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120014 | phospholipid transfer activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G20080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=22.549; coverage=62.577; evalue=2.13e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G61050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.449; coverage=67.638; evalue=4.42e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G04220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=23.958; coverage=44.172; evalue=3.06e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23344 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.096; coverage=54.141; evalue=1.83e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2542267 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=25.064; coverage=59.969; evalue=2.53e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release |