Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021852 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:138669809-138672845 (+) |
| Description | Similar to At5g05600: Probable 2-oxoglutarate-dependent dioxygenase At5g05600 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021852 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g05600 |
2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway. | |
At3g11180 |
2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway. | No verified direct reference in this release |
At3g55970 |
2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway. | No verified direct reference in this release |
At2g38240 |
2-oxoglutarate-dependent dioxygenase involved in the oxidation of jasmonate (JA), a stress-induced phytohormone synthesized in response to attack by pathogens and herbivores, which triggers the activation of defense responses via the JA-mediated signaling pathway. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097237 | cellular response to toxic substance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900150 | regulation of defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900366 | negative regulation of defense response to insect | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000022 | regulation of jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005506 | iron ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031418 | L-ascorbic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.525; coverage=95.278; evalue=3.59e-82; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045431 | flavonol synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.525; coverage=95.278; evalue=3.59e-82; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045486 | flavanone 3-dioxygenase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.525; coverage=95.278; evalue=3.59e-82; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.525; coverage=95.278; evalue=3.59e-82; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0120091 | jasmonic acid hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ag:AAP57395 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.525; coverage=95.278; evalue=3.59e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G38240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.695; coverage=97.5; evalue=5.62e-143 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G11180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.732; coverage=99.444; evalue=1.41e-161 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G55970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.264; coverage=101.111; evalue=2.1e-161 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G05600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.662; coverage=98.611; evalue=2.06e-169 | UniProtKB/Swiss-Prot DAT 2026 current_release |