RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_021760
Query referenceOH1004
LocationChr04:136460448-136461809 (+)
DescriptionSimilar to Peptide methionine sulfoxide reductase (Lactuca sativa OX%3D4236)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_021760 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 11 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g25130 Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins.
Differential regulation of plastidial and cytosolic isoforms of peptide methionine sulfoxide reductase in Arabidopsis.2000 · DOI: 10.1104/pp.123.1.255
A peptide methionine sulfoxide reductase highly expressed in photosynthetic tissue in Arabidopsis thaliana can protect the chaperone-like activity of a chloroplast-localized small heat shock protein.2002 · DOI: 10.1046/j.1365-313x.2002.029005545.x
At5g61640 Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. No verified direct reference in this release
At5g07470 Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034599cellular response to oxidative stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008113peptide-methionine (S)-S-oxide reductase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=93.436; coverage=100.0; evalue=7.62e-172; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033744L-methionine (S)-S-oxide reductase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=93.436; coverage=100.0; evalue=7.62e-172; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G25130KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.217; coverage=101.544; evalue=3.4e-116UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G07470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.51; coverage=78.764; evalue=2.63e-112UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G61640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=74.51; coverage=78.764; evalue=6.85e-114UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbna:106346565KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.498; coverage=101.544; evalue=4.92e-116UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbna:106442570KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.498; coverage=101.544; evalue=4.92e-116UniProtKB/Swiss-Prot DAT 2026 current_release