Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021549 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:132237469-132237813 (+) |
| Description | Similar to LSU2: Protein RESPONSE TO LOW SULFUR 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021549 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g24660 |
May be involved in defense responses monitoring. | No verified direct reference in this release |
At3g49580 |
Protein RESPONSE TO LOW SULFUR 1. | No verified direct reference in this release |
At5g24655 |
Required for flower development in short-day conditions. | No verified direct reference in this release |
At3g49570 |
Protein RESPONSE TO LOW SULFUR 3. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002229 | defense response to oomycetes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009909 | regulation of flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.086; coverage=81.579; evalue=4.77e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010438 | cellular response to sulfur starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0047484 | regulation of response to osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048587 | regulation of short-day photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.086; coverage=81.579; evalue=4.77e-15; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098869 | cellular oxidant detoxification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G49570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.636; coverage=38.596; evalue=4.86e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G49580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.237; coverage=81.579; evalue=2.35e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G24655 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.086; coverage=81.579; evalue=4.77e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G24660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=47.312; coverage=81.579; evalue=6.57e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |