Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_021409 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:129078094-129082249 (-) |
| Description | Similar to CHUP1: Protein CHUP1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021409 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g25690 |
Required for the positioning and movement of chloroplasts. | |
At4g18570 |
Microtubule-associated protein involved in the regulation of anisotropic petal and cotyledons growth and shape by affecting cortical microtubule organization. | |
At1g48280 |
Microtubule-associated protein probably involved in the regulation of microtubule organization. | No verified direct reference in this release |
At1g07120 |
Microtubule-associated protein probably involved in the regulation of microtubule organization. | No verified direct reference in this release |
At4g04980 |
Uncharacterized protein At4g04980. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009902 | chloroplast relocation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030041 | actin filament polymerization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043622 | cortical microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048446 | petal morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048826 | cotyledon morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051211 | anisotropic cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071260 | cellular response to mechanical stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072699 | protein localization to cortical microtubule cytoskeleton | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090436 | leaf pavement cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005874 | microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=46.939; coverage=30.561; evalue=1.23e-72; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055028 | cortical microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071944 | cell periphery | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005102 | signaling receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005522 | profilin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.148; coverage=28.067; evalue=4.31e-93; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051015 | actin filament binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=47.547; coverage=27.547; evalue=4.56e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G25690 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.616; coverage=68.191; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G04980 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.848; coverage=31.393; evalue=5.43e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release |