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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_020884
Query referenceOH1004
LocationChr04:112840458-112842559 (+)
DescriptionSimilar to BHLH90: Transcription factor bHLH90 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_020884 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g10610 Transcription factor bHLH90. No verified direct reference in this release
At2g16910 Transcription factor. No verified direct reference in this release
At5g57150 Transcription factor bHLH35. No verified direct reference in this release
At4g21330 Transcription factor.
Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor.2006 · DOI: 10.1242/dev.02463

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0120500 Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009555pollen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.394; coverage=52.52; evalue=3.82e-30; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048653anther developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048654anther morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048657anther wall tapetum cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048658anther wall tapetum developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.394; coverage=52.52; evalue=3.82e-30; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.394; coverage=52.52; evalue=3.82e-30; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003682chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.394; coverage=52.52; evalue=3.82e-30; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043565sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046983protein dimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G10610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.419; coverage=114.058; evalue=1.73e-74UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G16910KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.394; coverage=52.52; evalue=3.82e-30UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0120500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4328113KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.846; coverage=51.724; evalue=1.16e-26UniProtKB/Swiss-Prot DAT 2026 current_release