Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_019168`
Query reference	OH1004
Location	Chr04:25192443-25194437 (-)
Description	Similar to At1g14600: Putative Myb family transcription factor At1g14600 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_019168 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g14600`	Putative transcription factor.	No verified direct reference in this release
`At5g42630`	Probable transcription factor that regulates carpel integuments formation.	ABERRANT TESTA SHAPE encodes a KANADI family member, linking polarity determination to separation and growth of Arabidopsis ovule integuments.2006 · DOI: 10.1111/j.1365-313x.2006.02717.x A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4.2010 · DOI: 10.1111/j.1467-7652.2010.00525.x

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0566600`	Transcriptional repressor that plays a role in the regulation of organ identity and spikelet meristem determinacy.	MORE FLORET1 Encodes a MYB Transcription Factor That Regulates Spikelet Development in Rice.2020 · DOI: 10.1104/pp.20.00658
`Os06g0670300`	Probable transcription factor involved in the regulation of plant height by elongating internode cell length.	OsMPH1 regulates plant height and improves grain yield in rice.2017 · DOI: 10.1371/journal.pone.0180825 OsMYB45 plays an important role in rice resistance to cadmium stress.2017 · DOI: 10.1016/j.plantsci.2017.08.002
`Os09g0395300`	Probable transcription factor that regulates abaxial identity during leaf development.	SHALLOT-LIKE1 is a KANADI transcription factor that modulates rice leaf rolling by regulating leaf abaxial cell development.2009 · DOI: 10.1105/tpc.108.061457

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010158	abaxial cell fate specification	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.164; coverage=18.481; evalue=5.33e-19; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010229	inflorescence development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.164; coverage=18.481; evalue=5.33e-19; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010582	floral meristem determinacy	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010629	negative regulation of gene expression	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030154	cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048481	plant ovule development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.93; coverage=17.975; evalue=6.7e-19; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080060	integument development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.93; coverage=17.975; evalue=6.7e-19; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009505	plant-type cell wall	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.93; coverage=17.975; evalue=6.7e-19; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.164; coverage=18.481; evalue=5.33e-19; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G14600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=67.164; coverage=16.962; evalue=1.91e-24	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G42630	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.93; coverage=17.975; evalue=6.7e-19	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0566600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.134; coverage=16.962; evalue=2.3e-27	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os06g0670300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=61.194; coverage=16.962; evalue=3.06e-23	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os09g0395300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.164; coverage=18.481; evalue=5.33e-19	UniProtKB/Swiss-Prot DAT 2026 current_release