Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_019153 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:24762435-24763657 (-) |
| Description | Similar to PDX1: Probable pyridoxal 5'-phosphate synthase subunit PDX1 (Hevea brasiliensis OX%3D3981) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_019153 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g01410 |
Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. | No verified direct reference in this release |
At2g38230 |
Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0100200 |
Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006520 | amino acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006982 | response to lipid hydroperoxide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008615 | pyridoxine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010224 | response to UV-B | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010335 | response to non-ionic osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015994 | chlorophyll metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042538 | hyperosmotic salinity response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042823 | pyridoxal phosphate biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.026; coverage=91.15; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.026; coverage=91.15; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016843 | amine-lyase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036381 | pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.557; coverage=91.15; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G38230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=88.026; coverage=91.15; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G01410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=92.233; coverage=91.15; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0100200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=85.714; coverage=92.92; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |