Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_018947 |
|---|---|
| Query reference | OH1004 |
| Location | Chr04:20318264-20318638 (-) |
| Description | Similar to CP12-2: Calvin cycle protein CP12-2%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018947 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g62410 |
Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. | |
At2g47400 |
Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. | |
At1g76560 |
Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009744 | response to sucrose | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018316 | peptide cross-linking via L-cystine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019253 | reductive pentose-phosphate cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034605 | cellular response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0065003 | protein-containing complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071454 | cellular response to anoxia | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080153 | negative regulation of reductive pentose-phosphate cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.488; coverage=104.032; evalue=3.86e-34; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.488; coverage=104.032; evalue=3.86e-34; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016151 | nickel cation binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IPI:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030674 | protein-macromolecule adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IPI:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G76560 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.148; coverage=65.323; evalue=2.61e-19 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G47400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.488; coverage=104.032; evalue=3.86e-34 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G62410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.788; coverage=106.452; evalue=2.46e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cre:CHLRE_08g380250v5 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.351; coverage=59.677; evalue=9.42e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |