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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_015028
Query referenceOH1004
LocationChr03:62163223-62164995 (+)
DescriptionSimilar to CYP82C4: Xanthotoxin 5-hydroxylase CYP82C4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_015028 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g31940 Can hydroxylate xanthotoxin (8-methoxypsoralen) to form 5- hydroxyxanthotoxin (5-hydroxy-8-methoxypsoralen) in vivo and in vitro.
In planta biocatalysis screen of P450s identifies 8-methoxypsoralen as a substrate for the CYP82C subfamily, yielding original chemical structures.2008 · DOI: 10.1016/j.chembiol.2008.01.008
Arabidopsis CYP82C4 expression is dependent on Fe availability and circadian rhythm, and correlates with genes involved in the early Fe deficiency response.2011 · DOI: 10.1016/j.jplph.2010.11.020
At4g31970 Involved in the biosynthetic pathway to 4-hydroxyindole-3- carbonyl nitrile (4-OH-ICN), a cyanogenic metabolite required for inducible pathogen defense.
In planta biocatalysis screen of P450s identifies 8-methoxypsoralen as a substrate for the CYP82C subfamily, yielding original chemical structures.2008 · DOI: 10.1016/j.chembiol.2008.01.008
A new cyanogenic metabolite in Arabidopsis required for inducible pathogen defence.2015 · DOI: 10.1038/nature14907
At4g31950 Cytochrome P450 82C3. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.875; coverage=94.275; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009699phenylpropanoid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.192; coverage=93.023; evalue=4.31e-177; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009821alkaloid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.036; coverage=94.991; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010039response to iron ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010446response to alkaline pHBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071281cellular response to iron ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071456cellular response to hypoxiaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.875; coverage=94.275; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106146sideretin biosynthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004497monooxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005506iron ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.036; coverage=94.991; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygenMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.871; coverage=94.454; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0020037heme bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106144fraxetin 5-hydroxylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106149indole-3-carbonyl nitrile 4-hydroxylase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.875; coverage=94.275; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGag:ALG05144KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.192; coverage=93.023; evalue=4.31e-177UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGag:UQZ09627KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.036; coverage=94.991; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G31940KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.902; coverage=94.454; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G31950KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=55.871; coverage=94.454; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G31970KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.875; coverage=94.275; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release