基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_014682 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:54763725-54766621 (-) |
| 描述 | Similar to GAM1: Transcription factor GAMYB (Oryza sativa subsp. indica OX%3D39946) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_014682 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 26 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g11440 |
α-淀粉酶表达的转录激活剂,与靶基因启动子中的 5'-CAACTGTC-3' 基序结合。 | |
At2g32460 |
转录激活因子。 |
ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination.2007 · DOI: 10.1111/j.1365-313x.2006.02980.x The microRNA159-regulated GAMYB-like genes inhibit growth and promote programmed cell death in Arabidopsis.2010 · DOI: 10.1104/pp.110.160630
|
At5g06100 |
α-淀粉酶表达的转录激活剂,与靶基因启动子中的 5'-CAACTGTC-3' 基序结合。 |
The Arabidopsis GAMYB-like genes, MYB33 and MYB65, are microRNA-regulated genes that redundantly facilitate anther development.2005 · DOI: 10.1105/tpc.104.027920
|
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
UniProt: A2WW87 |
激活糊粉层细胞中赤霉素依赖的α-淀粉酶表达的转录激活因子。 | 暂无已核实直接文献 |
Os01g0812000 |
糊粉细胞中赤霉素依赖性 α-淀粉酶表达的转录激活剂。 |
Loss-of-function mutations of the rice GAMYB gene impair alpha-amylase expression in aleurone and flower development.2004 · DOI: 10.1105/tpc.017327 Gibberellin modulates anther development in rice via the transcriptional regulation of GAMYB.2009 · DOI: 10.1105/tpc.108.062935
|
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=70.37; 覆盖度=27.383; E 值=1.71e-61; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009735 | response to cytokinin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=70.37; 覆盖度=27.383; E 值=1.71e-61; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009789 | positive regulation of abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043068 | positive regulation of programmed cell death | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045926 | negative regulation of growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048235 | pollen sperm cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048653 | anther development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:EnsemblPlants | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048655 | anther wall tapetum morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080092 | regulation of pollen tube growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901371 | regulation of leaf morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990019 | protein storage vacuole organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.912; 覆盖度=82.759; E 值=1.93e-77; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.912; 覆盖度=82.759; E 值=3.13e-77; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=70.37; 覆盖度=27.383; E 值=1.71e-61; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G32460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.881; 覆盖度=27.181; E 值=2.94e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G11440 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=39.558; 覆盖度=82.556; E 值=6e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G06100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=70.37; 覆盖度=27.383; E 值=1.71e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0812000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=41.912; 覆盖度=82.759; E 值=3.13e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release |