Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014591 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:53216484-53219173 (+) |
| Description | Similar to PAM71-HL: Protein PAM71-homolog%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014591 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 19 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g13590 |
Probable chloroplast-localized Mn(2+)/H(+) and/or Ca(2+)/H(+) antiporter regulating Ca(2+), Mn(2+) and pH homeostasis. | No verified direct reference in this release |
At1g64150 |
Mn(2+)/H(+) exchanger, which transport Mn(2+)from the chloroplast stroma into the acidic thylakoid lumen. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os11g0544500 |
GDT1-like protein 2, chloroplastic. | No verified direct reference in this release |
Os01g0221700 |
GDT1-like protein 1, chloroplastic. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006816 | calcium ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.393; coverage=59.28; evalue=1.5e-47; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010270 | photosystem II oxygen evolving complex assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.706; coverage=60.388; evalue=3.78e-45; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019722 | calcium-mediated signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032468 | Golgi calcium ion homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032472 | Golgi calcium ion transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070588 | calcium ion transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071421 | manganese ion transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.393; coverage=59.28; evalue=1.5e-47; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009534 | chloroplast thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.706; coverage=60.388; evalue=3.78e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009535 | chloroplast thylakoid membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.706; coverage=60.388; evalue=3.78e-45; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009706 | chloroplast inner membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009941 | chloroplast envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031969 | chloroplast membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.124; coverage=85.042; evalue=2.39e-128; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005384 | manganese ion transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015085 | calcium ion transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015095 | magnesium ion transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.706; coverage=60.388; evalue=3.78e-45; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046873 | metal ion transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.393; coverage=59.28; evalue=1.5e-47; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G64150 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.706; coverage=60.388; evalue=3.78e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G13590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.896; coverage=95.845; evalue=2.14e-147 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os11g0544500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.124; coverage=85.042; evalue=2.39e-128 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9272318 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.111; coverage=62.327; evalue=1.3e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll0615 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.393; coverage=59.28; evalue=1.5e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release |