Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_014268 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:45029652-45030532 (+) |
| Description | Similar to S-RBP11: Small RNA-binding protein 11%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014268 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 45 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g06210 |
Probable RNA-binding protein that may be involved in salt and oxidative stress tolerance. | |
At3g23830 |
Possibly has a role in RNA transcription or processing during stress. | |
At1g73530 |
Involved in C-to-U editing of chloroplastic RNA. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000398 | mRNA splicing, via spliceosome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.374; coverage=67.347; evalue=8.21e-17; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006858 | extracellular transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006970 | response to osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016477 | cell migration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016554 | cytidine to uridine editing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.374; coverage=67.347; evalue=8.21e-17; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030308 | negative regulation of cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.857; coverage=61.905; evalue=1.15e-16; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034063 | stress granule assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048255 | mRNA stabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050658 | RNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050688 | regulation of defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060212 | negative regulation of nuclear-transcribed mRNA poly(A) tail shortening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.857; coverage=61.905; evalue=1.15e-16; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900864 | mitochondrial RNA modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900871 | chloroplast mRNA modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.374; coverage=67.347; evalue=8.21e-17; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901002 | positive regulation of response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.449; coverage=72.789; evalue=9.52e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902806 | regulation of cell cycle G1/S phase transition | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.857; coverage=61.905; evalue=1.15e-16; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990428 | miRNA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005681 | spliceosomal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.449; coverage=72.789; evalue=9.52e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.449; coverage=72.789; evalue=9.52e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.449; coverage=72.789; evalue=9.52e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008266 | poly(U) RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.857; coverage=61.905; evalue=1.15e-16; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030371 | translation repressor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035197 | siRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035198 | miRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043022 | ribosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070181 | small ribosomal subunit rRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G73530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.374; coverage=67.347; evalue=8.21e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G23830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.71; coverage=63.265; evalue=3.51e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G06210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.449; coverage=72.789; evalue=9.52e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81825 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.857; coverage=61.905; evalue=1.15e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:379761 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.857; coverage=52.381; evalue=6.23e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release |