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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_013794
Query referenceOH1004
LocationChr03:36078494-36081272 (-)
DescriptionSimilar to D2HGDH: D-2-hydroxyglutarate dehydrogenase%2C mitochondrial (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_013794 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g36400 May catalyze the oxidation of (R)-2-hydroxyglutarate to 2-oxoglutarate.
Two D-2-hydroxy-acid dehydrogenases in Arabidopsis thaliana with catalytic capacities to participate in the last reactions of the methylglyoxal and beta-oxidation pathways.2009 · DOI: 10.1074/jbc.m109.021253

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0187200 Catalyzes the oxidation of D-2-hydroxyglutarate to alpha-ketoglutarate. No verified direct reference in this release
UniProt: B8B7X6 Catalyzes the oxidation of D-2-hydroxyglutarate to alpha-ketoglutarate. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006089lactate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=ISS:HGNC-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00061032-oxoglutarate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006108malate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.664; coverage=84.547; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009853photorespirationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010042response to manganese ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=ISS:HGNC-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010043response to zinc ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=ISS:HGNC-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010230alternative respirationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031648protein destabilizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=IMP:DisProtUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032025response to cobalt ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=ISS:HGNC-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901275tartrate metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=ISS:HGNC-UCLUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005759mitochondrial matrixCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.664; coverage=84.547; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0047545(S)-2-hydroxyglutarate dehydrogenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051990(R)-2-hydroxyglutarate dehydrogenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071949FAD bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G36400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.524; coverage=98.224; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdre:565889KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.664; coverage=84.547; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:728294KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.085; coverage=83.481; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release