Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_012965 |
|---|---|
| Query reference | OH1004 |
| Location | Chr03:21652878-21656281 (+) |
| Description | Similar to HD16: Casein kinase 1-like protein HD16 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012965 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 26 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os03g0793500 |
Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006468 | protein phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006897 | endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.282; coverage=42.645; evalue=1.49e-59; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010476 | gibberellin mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016055 | Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58; UniProt GO evidence=IMP:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030100 | regulation of endocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.282; coverage=42.645; evalue=1.49e-59; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58; UniProt GO evidence=IMP:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045104 | intermediate filament cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048586 | regulation of long-day photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060069 | Wnt signaling pathway, regulating spindle positioning | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58; UniProt GO evidence=IMP:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090090 | negative regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000776 | kinetochore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58; UniProt GO evidence=IDA:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036064 | ciliary basal body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.716; coverage=42.942; evalue=7.16e-58; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | cel:CELE_C03C10.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=39.223; coverage=42.051; evalue=3.31e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0793500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=77.349; coverage=88.559; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2541341 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.282; coverage=42.645; evalue=1.49e-59 | UniProtKB/Swiss-Prot DAT 2026 current_release |