Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_012784`
Query reference	OH1004
Location	Chr03:18718585-18719454 (+)
Description	Similar to DET2: Steroid 5-alpha-reductase DET2 (Gossypium hirsutum OX%3D3635)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_012784 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g38050`	Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide (BL).	Arabidopsis det2 is defective in the conversion of (24R)-24-methylcholest-4-En-3-one to (24R)-24-methyl-5alpha-cholestan-3-one in brassinosteroid biosynthesis.1999 · DOI: 10.1104/pp.120.3.833 Brassinosteroids control the proliferation of leaf cells of Arabidopsis thaliana.2002 · DOI: 10.1093/pcp/pcf024 5alpha-Reductase activity in Lycopersicon esculentum: cloning and functional characterization of LeDET2 and evidence of the presence of two isoenzymes.2005 · DOI: 10.1016/j.jsbmb.2005.04.035 CYP90A1/CPD, a brassinosteroid biosynthetic cytochrome P450 of Arabidopsis, catalyzes C-3 oxidation.2012 · DOI: 10.1074/jbc.m112.392720 Brassinosteroid regulates seed size and shape in Arabidopsis.2013 · DOI: 10.1104/pp.113.217703 A role for brassinosteroids in light-dependent development of Arabidopsis.1996 · DOI: 10.1126/science.272.5260.398 Conservation of function between mammalian and plant steroid 5alpha-reductases.1997 · DOI: 10.1073/pnas.94.8.3554 The Arabidopsis deetiolated2 mutant is blocked early in brassinosteroid biosynthesis.1997 · DOI: 10.1105/tpc.9.11.1951

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006665	sphingolipid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006694	steroid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009416	response to light stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.66; coverage=90.038; evalue=1.16e-14; UniProt GO evidence=TAS:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010268	brassinosteroid homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.66; coverage=90.038; evalue=1.16e-14; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016132	brassinosteroid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030497	fatty acid elongation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042761	very long-chain fatty acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090377	seed trichome initiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090378	seed trichome elongation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005789	endoplasmic reticulum membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016491	oxidoreductase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047751	3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102758	very-long-chain enoyl-CoA reductase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G38050	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.66; coverage=90.038; evalue=1.16e-14	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	bdi:100827766	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.963; coverage=41.379; evalue=3.33e-14	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	cel:CELE_C15F1.6	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.365; coverage=79.693; evalue=5.53e-14	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0270270	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=28.824; coverage=65.134; evalue=3.11e-16	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ghi:107948867	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=27.826; coverage=88.123; evalue=1.14e-19	UniProtKB/Swiss-Prot DAT 2026 current_release