基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_012054 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr03:5608439-5610995 (-) |
| 描述 | Similar to POLR3D: DNA-directed RNA polymerase III subunit RPC4 (Bos taurus OX%3D9913) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_012054 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 2 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006383 | transcription by RNA polymerase III | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006384 | transcription initiation at RNA polymerase III promoter | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006386 | termination of RNA polymerase III transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032728 | positive regulation of interferon-beta production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042797 | tRNA transcription by RNA polymerase III | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045089 | positive regulation of innate immune response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=IC:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005666 | RNA polymerase III complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.828; 覆盖度=46.177; E 值=2.11e-07; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | hsa:661 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=27.152; 覆盖度=46.177; E 值=8.66e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67065 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=34.737; 覆盖度=29.052; E 值=7.5e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |