基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_010080 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:139510060-139513686 (-) |
| 描述 | Similar to PDF2: Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_010080 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 20 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g04890 |
可能结合L1盒DNA序列5′-TAAATG[CT]A-3′的转录因子。 |
Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis.2003 · DOI: 10.1242/dev.00292
|
At4g21750 |
可能参与胚胎发生过程中细胞规格和模式形成的转录因子。 |
Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein.2001 · DOI: 10.1046/j.1365-313x.2001.01047.x
|
At1g05230 |
可能的转录因子(通过同源推测)。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os04g0627000 |
可能的转录因子。 | 暂无已核实直接文献 |
Os08g0187500 |
可能参与早期胚胎发生过程中原胚层分化和放射状图案形成的可能转录因子。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010090 | trichome morphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048354 | mucilage biosynthetic process involved in seed coat development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048497 | maintenance of floral organ identity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048825 | cotyledon development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052541 | plant-type cell wall cellulose metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090627 | plant epidermal cell differentiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000033 | regulation of seed dormancy process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000144 | positive regulation of DNA-templated transcription initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=77.836; 覆盖度=104.408; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G05230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=73.098; 覆盖度=101.377; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G04890 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=79.973; 覆盖度=101.791; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G21750 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=77.836; 覆盖度=104.408; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0627000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=77.98; 覆盖度=98.209; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0187500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=77.479; 覆盖度=97.245; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |