Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009911 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:135823710-135829763 (-) |
| Description | Similar to Os04g0620700: Nucleolin 2 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009911 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g18610 |
Involved in pre-rRNA processing and ribosome assembly. | No verified direct reference in this release |
At1g48920 |
Involved in pre-rRNA processing and ribosome assembly. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0620700 |
Involved in pre-rRNA processing and ribosome assembly. | No verified direct reference in this release |
Os08g0192900 |
Involved in pre-rRNA processing and ribosome assembly. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=36.938; evalue=1.49e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010305 | leaf vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010588 | cotyledon vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048366 | leaf development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048367 | shoot system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080056 | petal vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080057 | sepal vascular tissue pattern formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=36.938; evalue=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=36.938; evalue=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=36.938; evalue=1.49e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031491 | nucleosome binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.045; coverage=44.592; evalue=1.18e-47; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.967; coverage=35.441; evalue=1.22e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G18610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.045; coverage=44.592; evalue=1.18e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0620700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=45.045; coverage=36.938; evalue=1.49e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0192900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.393; coverage=35.607; evalue=1.48e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release |