Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_009803`
Query reference	OH1004
Location	Chr02:133905875-133908043 (-)
Description	Similar to Arginine decarboxylase (Pisum sativum OX%3D3888)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009803 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g34710`	Required for the biosynthesis of putrescine.	Arabidopsis stress-inducible gene for arginine decarboxylase AtADC2 is required for accumulation of putrescine in salt tolerance.2004 · DOI: 10.1016/j.bbrc.2003.11.119 Arabidopsis ADC genes involved in polyamine biosynthesis are essential for seed development.2005 · DOI: 10.1016/j.febslet.2005.01.048 Overexpression of ADC2 in Arabidopsis induces dwarfism and late-flowering through GA deficiency.2005 · DOI: 10.1111/j.1365-313x.2005.02465.x Putrescine is involved in Arabidopsis freezing tolerance and cold acclimation by regulating abscisic acid levels in response to low temperature.2008 · DOI: 10.1104/pp.108.122945 Role of Arginine decarboxylase (ADC) in Arabidopsis thaliana defence against the pathogenic bacterium Pseudomonas viridiflava.2015 · DOI: 10.1111/plb.12289 Simultaneous Silencing of Two Arginine Decarboxylase Genes Alters Development in Arabidopsis.2016 · DOI: 10.3389/fpls.2016.00300

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006527	L-arginine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006596	polyamine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006970	response to osmotic stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006979	response to oxidative stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008295	spermidine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009409	response to cold	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009446	putrescine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009611	response to wounding	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009753	response to jasmonic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009820	alkaloid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042179	nicotine biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008792	arginine decarboxylase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042803	protein homodimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=73.201; coverage=90.443; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G34710	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.769; coverage=100.554; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107759371	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.95; coverage=98.892; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	nta:107774919	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.464; coverage=99.169; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release