Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_009615 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:129772136-129774111 (+) |
| Description | Similar to BC1L6: COBRA-like protein 1 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009615 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g02210 |
COBRA-like protein 1. | No verified direct reference in this release |
At3g29810 |
COBRA-like protein 2. | No verified direct reference in this release |
At5g15630 |
COBRA-like protein 4. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0604300 |
Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. | No verified direct reference in this release |
Os03g0416300 |
COBRA-like protein 2. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009664 | plant-type cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009832 | plant-type cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009834 | plant-type secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.471; coverage=94.977; evalue=7.72e-135; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010214 | seed coat development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010215 | cellulose microfibril organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.731; coverage=94.292; evalue=2.4e-143; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048316 | seed development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048354 | mucilage biosynthetic process involved in seed coat development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052324 | plant-type cell wall cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.731; coverage=94.292; evalue=2.4e-143; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001006 | regulation of cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.471; coverage=94.977; evalue=7.72e-135; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.471; coverage=94.977; evalue=7.72e-135; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005797 | Golgi medial cisterna | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.731; coverage=94.292; evalue=2.4e-143; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.567; coverage=101.142; evalue=1.24e-138; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098552 | side of membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.731; coverage=94.292; evalue=2.4e-143; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G02210 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.567; coverage=101.142; evalue=1.24e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G29810 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.823; coverage=95.662; evalue=2.81e-136 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G15630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=44.471; coverage=94.977; evalue=7.72e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0416300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.588; coverage=97.032; evalue=8.57e-142 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0604300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.731; coverage=94.292; evalue=2.4e-143 | UniProtKB/Swiss-Prot DAT 2026 current_release |