基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_009213 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:120555995-120558457 (+) |
| 描述 | Similar to CCR1: Cinnamoyl-CoA reductase 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_009213 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 11 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g15950 |
参与木质素生物合成的后期阶段。 |
Cloning and characterization of irregular xylem4 (irx4): a severely lignin-deficient mutant of Arabidopsis.2001 · DOI: 10.1046/j.1365-313x.2001.01021.x Reassessment of effects on lignification and vascular development in the irx4 Arabidopsis mutant.2005 · DOI: 10.1016/j.phytochem.2004.12.016
|
At1g80820 |
肉桂酰辅酶A还原酶,可能参与与超敏反应相关的酚类化合物的形成。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.695; 覆盖度=97.91; E 值=2.61e-180; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007623 | circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=80.126; 覆盖度=94.627; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009699 | phenylpropanoid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010597 | green leaf volatile biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042754 | negative regulation of circadian rhythm | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.695; 覆盖度=97.91; E 值=2.61e-180; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016621 | cinnamoyl-CoA reductase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=84.685; 覆盖度=99.403; E 值=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G15950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=80.126; 覆盖度=94.627; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G80820 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=74.695; 覆盖度=97.91; E 值=2.61e-180 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mtr:11424763 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=77.532; 覆盖度=94.328; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mtr:25487973 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=77.477; 覆盖度=99.403; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |