基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_008559 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr02:102777085-102777908 (+) |
| 描述 | Similar to At3g19360: Zinc finger CCCH domain-containing protein 39 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_008559 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 54 条 GO 注释和 6 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g19360 |
含锌指CCCH结构域蛋白39。 | 暂无已核实直接文献 |
At1g32360 |
含锌指 CCCH 结构域的蛋白 12。 | 暂无已核实直接文献 |
At2g35430 |
含锌指CCCH结构域的蛋白28。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os08g0159800 |
含锌指CCCH结构域的蛋白56。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000122 | negative regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000165 | MAPK cascade | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000288 | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006402 | mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010837 | regulation of keratinocyte proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031086 | nuclear-transcribed mRNA catabolic process, deadenylation-independent decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032680 | regulation of tumor necrosis factor production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032703 | negative regulation of interleukin-2 production | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032897 | negative regulation of viral transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035278 | miRNA-mediated gene silencing by inhibition of translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0038066 | p38MAPK cascade | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042594 | response to starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043488 | regulation of mRNA stability | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044344 | cellular response to fibroblast growth factor stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051028 | mRNA transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060213 | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061158 | 3'-UTR-mediated mRNA destabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070935 | 3'-UTR-mediated mRNA stabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071222 | cellular response to lipopolysaccharide | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071356 | cellular response to tumor necrosis factor | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071364 | cellular response to epidermal growth factor stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071385 | cellular response to glucocorticoid stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097011 | cellular response to granulocyte macrophage colony-stimulating factor stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900153 | positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901835 | positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904246 | negative regulation of polynucleotide adenylyltransferase activity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904582 | positive regulation of intracellular mRNA localization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905869 | negative regulation of 3'-UTR-mediated mRNA stabilization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000637 | positive regulation of miRNA-mediated gene silencing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=24.138; 覆盖度=140.777; E 值=9.07e-14; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000900 | mRNA regulatory element binding translation repressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=24.138; 覆盖度=140.777; E 值=9.07e-14; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019901 | protein kinase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019957 | C-C chemokine binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031072 | heat shock protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035925 | mRNA 3'-UTR AU-rich region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IPI:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070063 | RNA polymerase binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071889 | 14-3-3 protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0160134 | protein-RNA sequence-specific adaptor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08; UniProt GO evidence=IDA:UniProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G32360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=24.138; 覆盖度=140.777; E 值=9.07e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G35430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=27.119; 覆盖度=85.922; E 值=9.34e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G19360 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=25.081; 覆盖度=149.029; E 值=1.58e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os08g0159800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=28.421; 覆盖度=92.233; E 值=4.83e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:7538 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.714; 覆盖度=40.777; E 值=3.95e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4344715 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=28.421; 覆盖度=92.233; E 值=4.83e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release |