Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_007479 |
|---|---|
| Query reference | OH1004 |
| Location | Chr02:49722390-49730515 (-) |
| Description | Similar to CSI1: Protein CELLULOSE SYNTHASE INTERACTIVE 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007479 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 43 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g22125 |
Regulator of the microtubular cytoskeleton. |
POM-POM2/cellulose synthase interacting1 is essential for the functional association of cellulose synthase and microtubules in Arabidopsis.2012 · DOI: 10.1105/tpc.111.093575 The Arabidopsis ARCP protein, CSI1, which is required for microtubule stability, is necessary for root and anther development.2012 · DOI: 10.1105/tpc.111.095059 Impaired cellulose synthase guidance leads to stem torsion and twists phyllotactic patterns in Arabidopsis.2013 · DOI: 10.1016/j.cub.2013.04.013
|
At1g77460 |
Regulator of the microtubular cytoskeleton (By similarity). | |
At1g44120 |
Regulator of the microtubular cytoskeleton. | No verified direct reference in this release |
At2g23140 |
Functions as an E3 ubiquitin ligase. | No verified direct reference in this release |
At2g28830 |
Functions as an E3 ubiquitin ligase. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0007166 | cell surface receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008360 | regulation of cell shape | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.037; coverage=96.966; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009833 | plant-type primary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009901 | anther dehiscence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010208 | pollen wall assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010215 | cellulose microfibril organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030244 | cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034614 | cellular response to reactive oxygen species | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043622 | cortical microtubule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048467 | gynoecium development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048658 | anther wall tapetum development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048868 | pollen tube development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050777 | negative regulation of immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051211 | anisotropic cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051592 | response to calcium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0052324 | plant-type cell wall cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.037; coverage=96.966; evalue=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070507 | regulation of microtubule cytoskeleton organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071555 | cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.237; coverage=97.609; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072699 | protein localization to cortical microtubule cytoskeleton | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904821 | chloroplast disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000067 | regulation of root morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001006 | regulation of cellulose biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005856 | cytoskeleton | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.237; coverage=97.609; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009898 | cytoplasmic side of plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010330 | cellulose synthase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.037; coverage=96.966; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036449 | microtubule minus-end | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055028 | cortical microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070696 | transmembrane receptor protein serine/threonine kinase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G44120 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.237; coverage=97.609; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G77460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.037; coverage=96.966; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G22125 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=75.925; coverage=100.644; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G23140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=36.129; coverage=7.126; evalue=7.53e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G28830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=32.474; coverage=8.92; evalue=1.37e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |