基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | LXL04_005624 |
|---|---|
| 当前查询版本 | OH1004 |
| 位置 | Chr01:169438256-169441670 (-) |
| 描述 | Similar to SIGC: RNA polymerase sigma factor sigC (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源：OH1004 · LXL04_005624 · GCA_047496595.1_OSU_TarKok_2.0。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g53920 |
Sigma 因子是促进质体编码的 RNA 聚合酶 附着到特定起始位点然后释放的起始因子。 | |
At1g08540 |
通过在光照条件下协调核基因组和叶绿体基因组，促进质体向叶绿体的转变所必需。 | 暂无已核实直接文献 |
At2g36990 |
Sigma 因子是促进质体编码的 RNA 聚合酶 附着到特定起始位点然后释放的起始因子。 |
A nuclear-encoded sigma factor, Arabidopsis SIG6, recognizes sigma-70 type chloroplast promoters and regulates early chloroplast development in cotyledons.2005 · DOI: 10.1111/j.1365-313x.2005.02362.x
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006352 | DNA-templated transcription initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006399 | tRNA metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.39; 覆盖度=65.478; E 值=1.58e-63; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.39; 覆盖度=65.478; E 值=1.58e-63; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.39; 覆盖度=65.478; E 值=1.58e-63; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.46; 覆盖度=65.291; E 值=2.68e-50; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071482 | cellular response to light stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071483 | cellular response to blue light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.46; 覆盖度=65.291; E 值=2.68e-50; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090351 | seedling development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.46; 覆盖度=65.291; E 值=2.68e-50; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001141 | regulation of RNA biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.405; 覆盖度=58.349; E 值=5.43e-51; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.46; 覆盖度=65.291; E 值=2.68e-50; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903865 | sigma factor antagonist complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.405; 覆盖度=58.349; E 值=5.43e-51; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003899 | DNA-directed RNA polymerase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016987 | sigma factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ana:all5263 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=34.405; 覆盖度=58.349; E 值=5.43e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G08540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=36.39; 覆盖度=65.478; E 值=1.58e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G36990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.46; 覆盖度=65.291; E 值=2.68e-50 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G53920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=44.064; 覆盖度=93.246; E 值=6.06e-118 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syf:Synpcc7942_0649 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.235; 覆盖度=55.91; E 值=1.32e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release |