Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_004554 |
|---|---|
| Query reference | OH1004 |
| Location | Chr01:140437779-140439054 (-) |
| Description | Similar to VPS24-1: Vacuolar protein sorting-associated protein 24 homolog 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_004554 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 11 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g22950 |
Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. | No verified direct reference in this release |
At3g45000 |
Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032509 | endosome transport via multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045324 | late endosome to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070676 | intralumenal vesicle formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000815 | ESCRT III complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.352; coverage=88.839; evalue=3.14e-85; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.352; coverage=88.839; evalue=3.14e-85; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005770 | late endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005771 | multivesicular body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031902 | late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.353; coverage=77.232; evalue=6.88e-47; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G45000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.352; coverage=88.839; evalue=3.14e-85 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G22950 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.223; coverage=102.232; evalue=2.08e-121 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dre:406621 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=42.614; coverage=78.571; evalue=1.24e-41 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:548983 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.197; coverage=77.232; evalue=9.86e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release |